The Pilot Jets are on the bottom side of the carb and need the D shaped tool and should be 2 1/4 turns out correct? And the Pilot Screws are the 5 screws under the choke covers that are used to synch the carbs but they don't have a specific number of turns out?.... right?
The pilot adjustment screws are the D-shaped ones that are used to adjust the volume of the pilot mixture that is added to the air flow after the throttle plates. The pilot jets are inside the carb bodies, and regulate the amount of fuel and air that are mixed together, and feed the pilot screws, and also transition ports that are just upstream of the throttle plates, and keep the mixture from going lean as the throttles are opened, until the needle jets take over.
The 5 screws under the choke covers set the throttle opening at idle for the 5 carbs, so that they match the reference carb throttle at idle.