I just recently cleaned my carburetors using lacquer thinner and berrymans carb cleaner (acetone + MEK + other solvents). It does a great job getting varnish off and and cleaning without leaving residue. Some notes about using it though:
1. Always use it in a well ventilated area, it gives off some pretty serious fumes.
2. Use nitrile gloves when handling it, stuff is not good to absorb into your skin.
3. Use a q-tip with lacquer thinner for the smaller parts (not threaded holes).
4. It does not necessarily work too great on 3M 847 glue (original carb bowl sealant from Honda.) I had to use a soft plastic brush in combination with MEK to remove all traces.
5. Do not soak in the lacquer thinner your float valves, drain screws with o-ring still attached, air check valves, 3 way fuel and air joints with o-rings, air mix screws without moving o-rings, or pretty anything that is rubber, silicon, or gasketing material you plan on re-using.
6. Without an instrument designed for cleaning carb jet passages, it may not be able to unclog a jet by itself.
In truth, I would probably go to a local chemical store (not HD or Lowes) to buy some MEK instead of lacquer thinner. But handle MEK even more carefully as it is supposedly pretty nasty to breath, and more so to absorb.
Why did you choose to use a new carb bank? Was the last one past repair or rebuild? Incase you have not been to red-eye I would check out there site:
https://sites.google.com/site/valkparts/ as it has most of the parts that are common for needing replacement, and any stuck jets you can order from
http://www.sudco.com/keihinjets.html 100 mains part # is 019-178 and 35 slows part # 019-005.