There's a couple of ways to address the drone issue.
There's a couple very recent active threads on restoring the piggies....and there's several ways to fix/restore them. Basically it depends on how much of the piggies you've got left to work with....if anything. Search around.
MarkT sells what he calls piggie plates. Basically, they're the piggies cut off from stock exhausts that he salvages before he does his glass-pak mods to them.
You can weld (or otherwise re-attach) them back on to the muffler can......however, I tried a set on mine that had the ragnar cut done to them (no baffles at all) and it sounded really weird....sorta high pitched. Didn't like that at all.
http://horseapple.com/Valkyrie/Valk_Products/M2W_Exhaust__System/m2w_exhaust__system.html Another option, which is the way I went, was a set of Rex Stainless Insert Silencers. These....
http://shopping.rexmar.com/Merchant2/merchant.mvc?Screen=CTGY&Category_Code=silencers-inline-insertYou'll need to drill one hole in each pipe/tip to secure them.
I recommend you read this thread......
http://www.valkyrieforum.com/bbs/index.php/topic,40398.0.htmlI highly recommend those silencers.....AND.....a set of Grumpys tips. The Grumpys will help disrupt the exhaust note coming out of the exhaust even more.....plus they look sweet.

The smaller bore Grumpys will help even more so.
http://www.grumpyscustomparts.com/apps/webstore/Basically, you can drill out all of your baffles and install the silencers and a set of Grumpys and fix your drone and still have a sweet rumblin' Valk.
Mine have all of the rear baffles drilled (actually, there gone....is in, it had the Ragnar cut done) with the silencers and Grumpys tips and I love the way it sounds now.